Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879830.1_cds_XP_016437308.1_33082
CDS Infomation

[gene=LOC107763344] [db_xref=GeneID:107763344] [protein=probable protein phosphatase 2C 50 isoform X3] [protein_id=XP_016437308.1] [location=join(10329..11048,11214..11555,11652..11757,12370..12704)] [gbkey=CDS]
Sequence

ATGGACTTCACCGGATATGAGCTGGTACCAAACACAAAGTGCAAGCTTCCTTCGGTGTCC
GTTGCTAATCAGAATACTAGGGTGACACGGGACAAAGCTAACCTTATGACAGTTGCCGAT
TGCCATGAAATCAGGAAAGGGAACAATTTTTCGACGACAGTGATAGCGAATGGAAATTGT
TTGATAACTACTGATGCAAATAATGACAGATCTAGGGACAATAGTTTGATTTCACCAACT
GATGAGCTATTAGGAAATATGACTTGTTCTAGTTCTCTAGTGGATGAGCGTGGCGGCACG
GCTGGAGATGAAGACAAGAAGGTTGGTGTATCCCAGAATCTGAGGAAGTCTTATTCATGT
GATTTGGCTAATGAGTTGGTTAATGAGTCAGAACTTGTAAGTGATCTTGTTTCCACCGGA
ATGAATGGTGTGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTACCACCATCCCCCCTT
GAGAGTTCAAATGAGATGAAGATAAGTAGGCCAAATGTCTTTGGTTTTGATTCTGTGCCG
CTTTGGGGGCTCACCACGATACAAGGAAAGAGGCCGGAGATGGAAGATGCAGCAGTAGCT
TTACCAAGGTTTCTGAGAATCCCATCTCAAATGTTGATGGATCCGCCAGCTTCTCATGCC
CTGAATCAAACACTAACGGCCCATTTATTTGGGGTTTACGATGGACATGGAGGCTCTCAG
CAGGTTGCTAATTATTGCCGTGAGCGTATCCATATGGCTTTAGCACAGGAGATAGATATT
GCGAAAGAGGATTCACATAATAATGAAAGTGTTAACTGGAAGGAGCAATGGTCGAAGGCT
TTCTTGAATTGTTTCTGTAGAGTTGATGATGAGGTAGGAGGGTTTGGTTGTGAAACAGAC
GGTACTGAGCCTGACCTTGCACCTATTGCTCCCGAAGCAGTTGGATCTACAGCTGTAGTT
GCTGTTGTTAGTCCAACCCATATTATAGTTGCAAATTGTGGTGATTCAAGGGCAGTCCTT
TGTCGGGGGAAATTACCCATGCCGTTGTCCATTGATCATAAACCAAATAGAGAAGATGAG
TGTTCGCGAATAGAAGCACTGGGAGGGAAGGTCATTAATTGGGATGGACATCGCGTTTCT
GGTGTTCTTGCAGTTTCAAGATCAATTGGTGATAGATATTTAAGGCCTTATGTGATTCCA
GATCCAGAAATGATGTTTGTACCCCGTGTAAAAGACGACGACTGTCTTATTTTAGCAAGT
GATGGTCTTTGGGATGTCTTGACAAATGAAGAAGCTTGTGAGGTGGCAAGGAGACGAATT
CTTCTCTGGCACAAAAAGAATGGTGGTACTTTGACTAACGAAAGGGGTGAAAACATCGAT
CCTGCTGCTCAGGATGCTGCAGAGTACTTAACACGACTTGCTCTCCAAAAGGGAAGCAGA
GACAATATATCTGTGATTGTGGTCGACTTGAAGGCGCAGAGGAAATTCAAGAAGAAAACG
TAG

Peptide Sequence

PEP ID

XP_016437308.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 50 isoform X3 [Nicotiana tabacum]
Sequence

MDFTGYELVPNTKCKLPSVSVANQNTRVTRDKANLMTVADCHEIRKGNNFSTTVIANGNC
LITTDANNDRSRDNSLISPTDELLGNMTCSSSLVDERGGTAGDEDKKVGVSQNLRKSYSC
DLANELVNESELVSDLVSTGMNGVVVGAEDYKRKLPPSPLESSNEMKISRPNVFGFDSVP
LWGLTTIQGKRPEMEDAAVALPRFLRIPSQMLMDPPASHALNQTLTAHLFGVYDGHGGSQ
QVANYCRERIHMALAQEIDIAKEDSHNNESVNWKEQWSKAFLNCFCRVDDEVGGFGCETD
GTEPDLAPIAPEAVGSTAVVAVVSPTHIIVANCGDSRAVLCRGKLPMPLSIDHKPNREDE
CSRIEALGGKVINWDGHRVSGVLAVSRSIGDRYLRPYVIPDPEMMFVPRVKDDDCLILAS
DGLWDVLTNEEACEVARRRILLWHKKNGGTLTNERGENIDPAAQDAAEYLTRLALQKGSR
DNISVIVVDLKAQRKFKKKT

Transcript Sequence

Gene sequence data has not been registered.